lcat.analysis package

Submodules

lcat.analysis.tracheal_distance module

BMI 260: Final Project Bronchi segmentation/identification

lcat.analysis.tracheal_distance.get_seed_boundary(lung_segmentation)

Given a lung_segmentation, identify and return the top slice of the trachea.

lcat.analysis.tracheal_distance.get_tracheal_distances(scan, lung_segmentation)

Calculate a distance map for every accessible voxel in the lung segmentation of the distance from the top of the trachea to the voxel. Returns a masked numpy array representing the distance assigned to each voxel.

Module contents

Analysis package of the Lung Cancer Action Team toolkit.